Frustrating!

Its so hard to help diagnose stuff online...If you're A/F ratio is good up until the issue I'd vote against a fueling issue. This is all assuming that the tuner checked fuel pressure at idle and WOT during the run and had a wideband to read the A/F..To tune it properly you have to get that right. I'm leaning more towards an ignition issue like I suggested a few posts ago. My car was a bitch to start initially and when I pulled the plugs I discovered that the shop who did my header install and did a plug change gapped the plugs at .060"! I changed the plugs, gapped em at .035" and it was like a whole different car. I learned a lesson about not doing everything myself. I got lazy and paid for it.
Check the basics first. Plug gap is critical, the MSD opti could be suspect. You may wanna dig up an AC Delco opti or a known good functioning opti, and swap it out to eliminate that as a variable. Bypass any after market ignition boxes. I had an Accel 300 box many years ago and when it failed it did some weird stuff at higher rpms. Check and recheck all wiring, grounds, etc. I dunno who your tuner is so I can't pass judgement. Good luck again..
--Alan
Did you do any pulls with a fuel pressure gauge attached to make sure the pressure isn't nosing over? Tell us more about the PCM. Are you getting any codes? And by that I mean, scan it as not all codes will illuminate the SES bulb.
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Of course, as the LT1 went out to pasture fourteen years ago, you'll see less and less of them every day. LSanything is where it's at today, certainly from a business point of view.
.Not all shops are like that, but its best to do a lot of research and talk to others who have used them before committing your car to a big expensive build.
Good luck!
Bill









